EnhancerDB
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  3. rs397795059[chr12:47758389]
Enhancers that have rs397795059[chr12:47758389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47747943 47766515 enh2318
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs397795059[chr12:47758389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47757434 47759897 ZNF143 GTRD no Epithelial (MCF-7) 21543497
chr12 47758101 47758437 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21543501
chr12 47758178 47759928 ZNF143 GTRD no Epithelial (MCF-7) 21543502
chr12 47758193 47760470 ZNF143 GTRD no Epithelial (MCF-7) 21543503
chr12 47758325 47760110 ZNF143 GTRD no Epithelial (MCF-7) 21543504
chr12 47758331 47759866 ZNF143 GTRD no Epithelial (MCF-7) 21543505
chr12 47758382 47758397 FOXP1 JASPAR yes 120701112
chr12 47758383 47758394 HOXC12 JASPAR yes 120701113
chr12 47758384 47758394 HOXD11 JASPAR yes 120701114
chr12 47758384 47758405 IRF1 JASPAR yes 120701115
chr12 47758386 47758401 FOXP1 JASPAR yes 120701116
chr12 47758387 47758402 FOXP1 JASPAR yes 120701117
chr12 47758388 47758394 TBP TRANSFAC yes 120701118
chr12 47758388 47758403 FOXP1 JASPAR yes 120701119
chr12 47758389 47758404 FOXP1 JASPAR yes 120701120
chr12 47758389 47759928 ZNF143 GTRD no Epithelial (MCF-7) 21543506
Genes associated with rs397795059[chr12:47758389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More