EnhancerDB
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  3. rs397799604[chr17:60254419]
Enhancers that have rs397799604[chr17:60254419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60253851 60272895 enh17275
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs397799604[chr17:60254419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777818
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777819
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280259
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280260
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280261
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280262
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280263
chr17 60250994 60255066 ZNF143 GTRD no Epithelial (MCF-7) 21777896
chr17 60250994 60255066 ZNF143 GTRD no Epithelial (MCF-7) 21777897
chr17 60254355 60254727 ZNF143 GTRD no Epithelial (MCF-7) 21777901
chr17 60254357 60254823 ZNF143 GTRD no Epithelial (MCF-7) 21777902
chr17 60254372 60254767 ZNF143 GTRD no Epithelial (MCF-7) 21777903
chr17 60254418 60254433 FOXP1 JASPAR yes 55189933
Genes associated with rs397799604[chr17:60254419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More