EnhancerDB
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  3. rs397799968[chr19:4588126]
Enhancers that have rs397799968[chr19:4588126]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
Transcript factors that have rs397799968[chr19:4588126]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4588117 4588137 RREB1 JASPAR yes 112176830
chr19 4588119 4588129 GSX1 JASPAR yes 112176831
chr19 4588119 4588129 GSX2 JASPAR yes 112176832
chr19 4588120 4588128 BSX JASPAR yes 112176833
chr19 4588120 4588130 HOXB13 JASPAR yes 112176834
chr19 4588120 4588130 HOXD13 JASPAR yes 112176835
chr19 4588121 4588131 HOXA13 JASPAR yes 112176836
chr19 4588121 4588131 HOXB13 JASPAR yes 112176837
chr19 4588121 4588131 HOXD13 JASPAR yes 112176838
chr19 4588122 4588126 YY1 TRANSFAC yes 112176839
chr19 4588123 4588138 FOXP1 JASPAR yes 112176840
chr19 4588125 4588131 TBP TRANSFAC yes 112176841
Genes associated with rs397799968[chr19:4588126], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More