EnhancerDB
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  3. rs397808279[chr2:24127407]
Enhancers that have rs397808279[chr2:24127407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 24121345 24130355 enh5351
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Lung (A549) Stomach Muscle (A673) Placenta Breast Blood (Karpas-422) Pancreas Epithelial (MCF-7)
Transcript factors that have rs397808279[chr2:24127407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 24127397 24127418 IRF1 JASPAR yes 72396178
chr2 24127400 24127414 SPI1 JASPAR yes 72396180
chr2 24127400 24127414 SPIC JASPAR yes 72396181
chr2 24127401 24127409 EHF JASPAR yes 72396182
chr2 24127401 24127422 IRF1 JASPAR yes 72396183
chr2 24127402 24127423 IRF1 JASPAR yes 72396184
chr2 24127403 24127408 ETS2 TRANSFAC yes 72396185
chr2 24127403 24127424 IRF1 JASPAR yes 72396186
chr2 24127404 24127425 IRF1 JASPAR yes 72396187
chr2 24127405 24127420 FOXP1 JASPAR yes 72396188
chr2 24127405 24127426 IRF1 JASPAR yes 72396189
chr2 24127406 24127421 FOXP1 JASPAR yes 72396190
chr2 24127406 24127427 IRF1 JASPAR yes 72396191
chr2 24127407 24127422 FOXP1 JASPAR yes 72396192
chr2 24127407 24127428 IRF1 JASPAR yes 72396193
Genes associated with rs397808279[chr2:24127407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More