EnhancerDB
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  3. rs397808740[chr5:149704221]
Enhancers that have rs397808740[chr5:149704221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149691605 149705895 enh22714
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs397808740[chr5:149704221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149704203 149704224 IRF1 JASPAR yes 66874621
chr5 149704212 149704226 STAT1 JASPAR yes 66874622
chr5 149704213 149704225 IRF1 JASPAR yes 66874623
Genes associated with rs397808740[chr5:149704221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More