EnhancerDB
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  3. rs397823828[chr1:16440698]
Enhancers that have rs397823828[chr1:16440698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16434153 16452566 enh26556
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs397823828[chr1:16440698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16439954 16443334 ZNF274 GTRD no Blood (GM12878) 107802219
chr1 16440692 16440707 FOXP1 JASPAR yes 27026064
chr1 16440693 16440708 FOXP1 JASPAR yes 27026065
chr1 16440694 16440709 FOXP1 JASPAR yes 27026066
chr1 16440695 16440710 FOXP1 JASPAR yes 27026067
chr1 16440696 16440711 FOXP1 JASPAR yes 27026068
chr1 16440696 16440717 IRF1 JASPAR yes 27026069
chr1 16440697 16440712 FOXP1 JASPAR yes 27026070
Genes associated with rs397823828[chr1:16440698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More