EnhancerDB
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  3. rs397828672[chr1:12658412]
Enhancers that have rs397828672[chr1:12658412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs397828672[chr1:12658412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12658394 12658415 IRF1 JASPAR yes 26837278
chr1 12658412 12658415 MYB TRANSFAC yes 26837280
Genes associated with rs397828672[chr1:12658412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More