EnhancerDB
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  3. rs397840227[chr19:950829]
Enhancers that have rs397840227[chr19:950829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 927725 963215 enh4948
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs397840227[chr19:950829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 950245 952110 TCF7L2 GTRD no Colon (HCT116) 21830890
chr19 950245 952110 TCF7L2 GTRD no Colon (HCT116) 108348555
chr19 950266 955932 ZNF274 GTRD no Blood (GM12878) 21830891
chr19 950266 955932 ZNF274 GTRD no Blood (GM12878) 108348556
chr19 950266 955932 ZNF274 GTRD no Blood (GM12878) 108348557
chr19 950266 955932 ZNF274 GTRD no Blood (GM12878) 108348558
chr19 950290 956659 ZNF274 GTRD no Blood (GM12878) 21830892
chr19 950290 956659 ZNF274 GTRD no Blood (GM12878) 108348559
chr19 950290 956659 ZNF274 GTRD no Blood (GM12878) 108348560
chr19 950290 956659 ZNF274 GTRD no Blood (GM12878) 108348561
chr19 950315 956778 ZNF274 GTRD no Blood (GM12878) 21830893
chr19 950315 956778 ZNF274 GTRD no Blood (GM12878) 108348562
chr19 950315 956778 ZNF274 GTRD no Blood (GM12878) 108348563
chr19 950315 956778 ZNF274 GTRD no Blood (GM12878) 108348564
chr19 950335 956670 ZNF274 GTRD no Blood (GM12878) 21830894
chr19 950335 956670 ZNF274 GTRD no Blood (GM12878) 108348565
chr19 950335 956670 ZNF274 GTRD no Blood (GM12878) 108348566
chr19 950335 956670 ZNF274 GTRD no Blood (GM12878) 108348567
chr19 950386 952298 ZNF274 GTRD no Blood (GM12878) 21830895
chr19 950386 952298 ZNF274 GTRD no Blood (GM12878) 108348568
chr19 950818 950839 IRF1 JASPAR yes 111986335
chr19 950824 950830 TCF4 TRANSFAC yes 111986337
chr19 950824 950839 FOXP1 JASPAR yes 111986338
chr19 950825 950836 FOXP2 JASPAR yes 111986339
chr19 950825 950837 FOXC2 JASPAR yes 111986340
chr19 950828 950848 RREB1 JASPAR yes 111986341
Genes associated with rs397840227[chr19:950829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More