EnhancerDB
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  3. rs397845380[chr10:88631559]
Enhancers that have rs397845380[chr10:88631559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 88609059 88634881 enh28312
Prostate (PC-3) Liver (HepG2) Kidney Brain (SK-N-MC) Esophagus Astrocyte Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs397845380[chr10:88631559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 88631480 88632000 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107929492
chr10 88631500 88631940 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21447624
chr10 88631500 88631940 TEAD4 UCSC Txn Factor no Conserved 107929493
chr10 88631500 88631940 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107929494
chr10 88631557 88631572 FOXP1 JASPAR yes 128864796
chr10 88631557 88631867 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107929495
chr10 88631558 88631573 FOXP1 JASPAR yes 128864797
chr10 88631559 88631574 FOXP1 JASPAR yes 128864798
chr10 88631559 88631580 IRF1 JASPAR yes 128864799
Genes associated with rs397845380[chr10:88631559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More