EnhancerDB
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  3. rs397854694[chr16:73065178]
Enhancers that have rs397854694[chr16:73065178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 73046817 73092190 enh16770
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397854694[chr16:73065178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 73065171 73065186 ZIC3 JASPAR yes 11427192
chr16 73065171 73065186 ZIC4 JASPAR yes 11427193
chr16 73065172 73065182 SP1 JASPAR yes 11427194
chr16 73065172 73065186 GLIS2 JASPAR yes 11427195
chr16 73065172 73065186 ZIC1 JASPAR yes 11427196
chr16 73065173 73065189 GLIS1 JASPAR yes 11427197
chr16 73065175 73065180 SP1 TRANSFAC yes 11427198
chr16 73065175 73065181 SP1 TRANSFAC yes 11427199
chr16 73065175 73065185 SP1 JASPAR yes 11427200
chr16 73065176 73065186 ZNF740 JASPAR yes 11427201
Genes associated with rs397854694[chr16:73065178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 72088522 72111145 + HPR ENSG00000261701.2 72088522 954033 Ovary 0.331441 15050