EnhancerDB
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  3. rs397855146[chr16:88990551]
Enhancers that have rs397855146[chr16:88990551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88969235 88997095 enh16904
Bone Marrow (K562) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs397855146[chr16:88990551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88988474 88991788 TCF7L2 GTRD no Colon (HCT116) 21737335
chr16 88988474 88991788 TCF7L2 GTRD no Colon (HCT116) 108224296
chr16 88988474 88991788 TCF7L2 GTRD no Colon (HCT116) 108224297
chr16 88988653 88991383 ZNF143 GTRD no Epithelial (MCF-7) 21737341
chr16 88988653 88991383 ZNF143 GTRD no Epithelial (MCF-7) 108224304
chr16 88988693 88991549 TCF7L2 GTRD no Colon (HCT116) 21737343
chr16 88988693 88991549 TCF7L2 GTRD no Colon (HCT116) 108224307
chr16 88988748 88991882 TCF7L2 GTRD no Colon (HCT116) 21737345
chr16 88988748 88991882 TCF7L2 GTRD no Colon (HCT116) 108224309
chr16 88988748 88991882 TCF7L2 GTRD no Colon (HCT116) 108224310
chr16 88988765 88990647 TCF7L2 GTRD no Colon (HCT116) 21737347
chr16 88988765 88990647 TCF7L2 GTRD no Colon (HCT116) 108224312
chr16 88990176 88996491 ZNF274 GTRD no Bone Marrow (K562) 21737354
chr16 88990176 88996491 ZNF274 GTRD no Bone Marrow (K562) 108224323
chr16 88990177 88996763 ZNF274 GTRD no Bone Marrow (K562) 21737355
chr16 88990177 88996763 ZNF274 GTRD no Bone Marrow (K562) 108224324
chr16 88990205 88992350 ZNF274 GTRD no Bone Marrow (K562) 21737356
chr16 88990205 88992350 ZNF274 GTRD no Bone Marrow (K562) 108224325
chr16 88990381 88996100 ZNF274 GTRD no Bone Marrow (K562) 21737357
chr16 88990381 88996100 ZNF274 GTRD no Bone Marrow (K562) 108224326
chr16 88990538 88990552 ZIC1 JASPAR yes 12310164
chr16 88990538 88990553 ZIC3 JASPAR yes 12310165
chr16 88990538 88990553 ZIC4 JASPAR yes 12310166
chr16 88990548 88990553 SP1 TRANSFAC yes 12310167
chr16 88990550 88990560 SP1 JASPAR yes 12310168
chr16 88990551 88990559 SP1 TRANSFAC yes 12310169
chr16 88990551 88990560 SP1 TRANSFAC yes 12310170
Genes associated with rs397855146[chr16:88990551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 88941266 89043612 - CBFA2T3 ENSG00000129993.10 89043612 0 Heart 0.136722 15169