EnhancerDB
  1. Home
  2. SNP
  3. rs397856346[chr17:29910538]
Enhancers that have rs397856346[chr17:29910538]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29902607 29916333 enh17096
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs397856346[chr17:29910538]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29910054 29911000 ZNF143 GTRD no Epithelial (MCF-7) 21750170
chr17 29910079 29910937 ZNF143 GTRD no Epithelial (MCF-7) 21750171
chr17 29910101 29911007 ZNF143 GTRD no Epithelial (MCF-7) 21750172
chr17 29910123 29910751 ZNF143 GTRD no Epithelial (MCF-7) 21750173
chr17 29910154 29910852 ZNF143 GTRD no Epithelial (MCF-7) 21750174
chr17 29910187 29910766 ZNF143 GTRD no Epithelial (MCF-7) 21750175
chr17 29910260 29910778 ZNF143 GTRD no Epithelial (MCF-7) 21750176
chr17 29910270 29910741 ZNF143 GTRD no Epithelial (MCF-7) 21750177
chr17 29910273 29910708 ZNF143 GTRD no Epithelial (MCF-7) 21750178
chr17 29910279 29910802 ZNF143 GTRD no Epithelial (MCF-7) 21750179
chr17 29910352 29910642 ZNF143 GTRD no Epithelial (MCF-7) 21750180
chr17 29910528 29910538 POU6F2 JASPAR yes 53847617
chr17 29910529 29910539 EMX1 JASPAR yes 53847618
chr17 29910529 29910539 EMX2 JASPAR yes 53847619
chr17 29910529 29910539 EN2 JASPAR yes 53847620
chr17 29910529 29910539 ESX1 JASPAR yes 53847621
chr17 29910529 29910539 GBX1 JASPAR yes 53847622
chr17 29910529 29910539 GBX2 JASPAR yes 53847623
chr17 29910529 29910539 GSX1 JASPAR yes 53847624
chr17 29910529 29910539 GSX2 JASPAR yes 53847625
chr17 29910529 29910539 HESX1 JASPAR yes 53847626
chr17 29910529 29910539 HOXA2 JASPAR yes 53847627
chr17 29910529 29910539 HOXB2 JASPAR yes 53847628
chr17 29910529 29910539 HOXB3 JASPAR yes 53847629
chr17 29910529 29910539 LBX2 JASPAR yes 53847630
chr17 29910529 29910539 LHX2 JASPAR yes 53847631
chr17 29910529 29910539 LHX6 JASPAR yes 53847632
chr17 29910529 29910539 MEOX1 JASPAR yes 53847633
chr17 29910529 29910539 MEOX2 JASPAR yes 53847634
chr17 29910529 29910539 MIXL1 JASPAR yes 53847635
chr17 29910529 29910539 MNX1 JASPAR yes 53847636
chr17 29910529 29910539 NOTO JASPAR yes 53847637
chr17 29910529 29910539 POU6F1 JASPAR yes 53847638
chr17 29910529 29910539 RAX JASPAR yes 53847639
chr17 29910530 29910538 BSX JASPAR yes 53847640
chr17 29910530 29910538 DLX6 JASPAR yes 53847641
chr17 29910530 29910538 EN1 JASPAR yes 53847642
chr17 29910530 29910538 ISX JASPAR yes 53847643
chr17 29910530 29910538 LBX1 JASPAR yes 53847644
chr17 29910530 29910538 LHX9 JASPAR yes 53847645
chr17 29910530 29910538 LMX1A JASPAR yes 53847646
chr17 29910530 29910538 LMX1B JASPAR yes 53847647
chr17 29910530 29910538 NKX6-1 JASPAR yes 53847648
chr17 29910530 29910538 NKX6-2 JASPAR yes 53847649
chr17 29910530 29910538 PAX4 JASPAR yes 53847650
chr17 29910530 29910538 PDX1 JASPAR yes 53847651
chr17 29910530 29910538 PRRX1 JASPAR yes 53847652
chr17 29910530 29910538 RAX2 JASPAR yes 53847653
chr17 29910530 29910538 SHOX JASPAR yes 53847654
chr17 29910530 29910538 UNCX JASPAR yes 53847655
chr17 29910530 29910538 VAX1 JASPAR yes 53847656
chr17 29910530 29910538 VAX2 JASPAR yes 53847657
chr17 29910530 29910538 VSX1 JASPAR yes 53847658
chr17 29910530 29910538 VSX2 JASPAR yes 53847659
chr17 29910530 29910546 POU4F3 JASPAR yes 53847660
chr17 29910531 29910541 PAX3 JASPAR yes 53847661
chr17 29910531 29910541 PAX7 JASPAR yes 53847662
chr17 29910531 29910542 PHOX2A JASPAR yes 53847663
chr17 29910531 29910542 PROP1 JASPAR yes 53847664
chr17 29910537 29910552 FOXP1 JASPAR yes 53847665
chr17 29910538 29910553 FOXP1 JASPAR yes 53847666
Genes associated with rs397856346[chr17:29910538], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More