EnhancerDB
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  3. rs397859936[chr19:6267413]
Enhancers that have rs397859936[chr19:6267413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6257625 6278924 enh17889
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Bone (Osteoblast) Lung Stomach Placenta Thyroid Pancreas Uterus Heart
Transcript factors that have rs397859936[chr19:6267413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6267407 6267428 IRF1 JASPAR yes 112265867
chr19 6267408 6267429 IRF1 JASPAR yes 112265868
chr19 6267410 6267425 FOXP1 JASPAR yes 112265869
chr19 6267411 6267426 FOXP1 JASPAR yes 112265870
chr19 6267412 6267418 TBP TRANSFAC yes 112265871
chr19 6267412 6267427 FOXP1 JASPAR yes 112265872
chr19 6267413 6267428 FOXP1 JASPAR yes 112265873
chr19 6267413 6267434 IRF1 JASPAR yes 112265874
Genes associated with rs397859936[chr19:6267413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More