EnhancerDB
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  3. rs397860947[chr1:23962355]
Enhancers that have rs397860947[chr1:23962355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397860947[chr1:23962355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23962340 23962358 MAFF JASPAR yes 27451267
chr1 23962341 23962356 MAFK JASPAR yes 27451268
chr1 23962345 23962356 NRL JASPAR yes 27451269
chr1 23962349 23962370 IRF1 JASPAR yes 27451270
chr1 23962351 23962366 PRDM1 JASPAR yes 27451271
chr1 23962351 23962366 STAT2 JASPAR yes 27451272
chr1 23962352 23962373 IRF1 JASPAR yes 27451273
chr1 23962353 23962374 IRF1 JASPAR yes 27451274
chr1 23962354 23962369 FOXP1 JASPAR yes 27451275
chr1 23962354 23962375 IRF1 JASPAR yes 27451276
chr1 23962355 23962370 FOXP1 JASPAR yes 27451277
chr1 23962355 23962376 IRF1 JASPAR yes 27451278
Genes associated with rs397860947[chr1:23962355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More