EnhancerDB
  1. Home
  2. SNP
  3. rs397862963[chr1:27329818]
Enhancers that have rs397862963[chr1:27329818]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27317684 27338176 enh11657
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs397862963[chr1:27329818]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27329808 27329818 ID4 JASPAR yes 27667880
chr1 27329812 27329833 IRF1 JASPAR yes 27667882
chr1 27329814 27329829 PRDM1 JASPAR yes 27667883
chr1 27329814 27329829 STAT2 JASPAR yes 27667884
chr1 27329814 27329835 IRF1 JASPAR yes 27667885
chr1 27329815 27329836 IRF1 JASPAR yes 27667886
chr1 27329816 27329837 IRF1 JASPAR yes 27667887
chr1 27329817 27329832 FOXP1 JASPAR yes 27667888
chr1 27329817 27329838 IRF1 JASPAR yes 27667889
chr1 27329818 27329833 FOXP1 JASPAR yes 27667890
chr1 27329818 27329839 IRF1 JASPAR yes 27667891
Genes associated with rs397862963[chr1:27329818], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More