EnhancerDB
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  3. rs397863059[chr1:2223144]
Enhancers that have rs397863059[chr1:2223144]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs397863059[chr1:2223144]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2223137 2223152 ZIC3 JASPAR yes 26232592
chr1 2223137 2223152 ZIC4 JASPAR yes 26232593
chr1 2223137 2223153 GLIS1 JASPAR yes 26232594
chr1 2223138 2223152 GLIS2 JASPAR yes 26232595
chr1 2223138 2223152 GLIS3 JASPAR yes 26232596
chr1 2223142 2223152 ZNF740 JASPAR yes 26232597
chr1 2223144 2223155 NFKB1 JASPAR yes 26232598
chr1 2223144 2223157 NFKB1 JASPAR yes 26232599
Genes associated with rs397863059[chr1:2223144], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More