EnhancerDB
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  3. rs397864217[chr1:28454804]
Enhancers that have rs397864217[chr1:28454804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28446825 28468055 enh182
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Stomach
Transcript factors that have rs397864217[chr1:28454804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28454792 28454813 IRF1 JASPAR yes 27744025
chr1 28454793 28454814 IRF1 JASPAR yes 27744026
chr1 28454794 28454809 PRDM1 JASPAR yes 27744027
chr1 28454798 28454819 IRF1 JASPAR yes 27744028
chr1 28454799 28454820 IRF1 JASPAR yes 27744029
chr1 28454800 28454805 ETS2 TRANSFAC yes 27744030
chr1 28454800 28454821 IRF1 JASPAR yes 27744031
chr1 28454801 28454822 IRF1 JASPAR yes 27744032
chr1 28454802 28454817 FOXP1 JASPAR yes 27744033
chr1 28454802 28454823 IRF1 JASPAR yes 27744034
chr1 28454803 28454818 FOXP1 JASPAR yes 27744035
chr1 28454803 28454824 IRF1 JASPAR yes 27744036
chr1 28454804 28454819 FOXP1 JASPAR yes 27744037
chr1 28454804 28454825 IRF1 JASPAR yes 27744038
Genes associated with rs397864217[chr1:28454804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More