EnhancerDB
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  3. rs397933036[chr1:116489478]
Enhancers that have rs397933036[chr1:116489478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116486861 116498070 enh67111
Prostate (PC-3) Prostate (RWPE1) Stomach Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs397933036[chr1:116489478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116488805 116490140 ZNF143 GTRD no Epithelial (MCF-7) 21331447
chr1 116488832 116492994 ZNF143 GTRD no Epithelial (MCF-7) 21331448
chr1 116488921 116490100 AR GTRD no Prostate (PC-3) 21331449
chr1 116488958 116489768 ZNF143 GTRD no Epithelial (MCF-7) 21331450
chr1 116488966 116489709 ZNF143 GTRD no Epithelial (MCF-7) 21331451
chr1 116489100 116489736 ZNF143 GTRD no Epithelial (MCF-7) 21331452
chr1 116489101 116490012 ZNF143 GTRD no Epithelial (MCF-7) 21331453
chr1 116489129 116489636 SOX2 GTRD no Neural Stem Cells (H9) 21331454
chr1 116489143 116490478 ZNF143 GTRD no Epithelial (MCF-7) 21331455
chr1 116489173 116489814 ZNF143 GTRD no Epithelial (MCF-7) 21331457
chr1 116489211 116489894 ZNF143 GTRD no Epithelial (MCF-7) 21331458
chr1 116489233 116489601 SOX2 GTRD no Neural Stem Cells (H9) 21331459
chr1 116489251 116489871 ZNF143 GTRD no Epithelial (MCF-7) 21331460
chr1 116489272 116489743 ZNF143 GTRD no Epithelial (MCF-7) 21331461
chr1 116489475 116489490 FOXP1 JASPAR yes 31768798
chr1 116489478 116489493 FOXP1 JASPAR yes 31768799
Genes associated with rs397933036[chr1:116489478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More