EnhancerDB
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  3. rs397940212[chr1:9620818]
Enhancers that have rs397940212[chr1:9620818]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397940212[chr1:9620818]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9620813 9620818 GATA1 TRANSFAC yes 26662221
chr1 9620813 9620819 GATA3 JASPAR yes 26662222
chr1 9620817 9620832 FOXP1 JASPAR yes 26662223
Genes associated with rs397940212[chr1:9620818], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More