EnhancerDB
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  3. rs397940310[chr3:187885378]
Enhancers that have rs397940310[chr3:187885378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187872023 187885615 enh7772
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Breast Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs397940310[chr3:187885378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 187885361 187885381 RREB1 JASPAR yes 8451931
chr3 187885363 187885383 RREB1 JASPAR yes 8451933
chr3 187885366 187885386 RREB1 JASPAR yes 8451934
chr3 187885372 187885393 IRF1 JASPAR yes 8451935
chr3 187885373 187885388 FOXP1 JASPAR yes 8451936
chr3 187885373 187885394 IRF1 JASPAR yes 8451937
chr3 187885375 187885390 FOXP1 JASPAR yes 8451938
chr3 187885377 187885392 FOXP1 JASPAR yes 8451939
chr3 187885378 187885393 FOXP1 JASPAR yes 8451940
Genes associated with rs397940310[chr3:187885378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More