EnhancerDB
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  3. rs397944168[chr1:228975624]
Enhancers that have rs397944168[chr1:228975624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs397944168[chr1:228975624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228975052 228976030 AR GTRD no Prostate (PC-3) 21388929
chr1 228975283 228975857 TCF7L2 GTRD no Colon (HCT116) 21388930
chr1 228975621 228975631 MLXIPL JASPAR yes 35934481
chr1 228975621 228975631 SREBF1 JASPAR yes 35934482
chr1 228975621 228975631 SREBF2 JASPAR yes 35934483
chr1 228975621 228975631 TFAP4 JASPAR yes 35934484
chr1 228975621 228975631 TFEC JASPAR yes 35934485
chr1 228975621 228975632 USF2 JASPAR yes 35934486
Genes associated with rs397944168[chr1:228975624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More