EnhancerDB
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  3. rs397953946[chr17:70418498]
Enhancers that have rs397953946[chr17:70418498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs397953946[chr17:70418498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70418185 70418621 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784974
chr17 70418341 70418721 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784976
chr17 70418380 70419569 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784977
chr17 70418388 70418824 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784978
chr17 70418404 70418843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784979
chr17 70418409 70418679 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784980
chr17 70418430 70418653 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784981
chr17 70418435 70418755 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784982
chr17 70418447 70418857 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784983
chr17 70418451 70418731 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784984
chr17 70418452 70419571 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784985
chr17 70418458 70418778 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784986
chr17 70418473 70418753 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784987
chr17 70418481 70418837 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784988
chr17 70418484 70418498 SPI1 JASPAR yes 55786337
chr17 70418484 70418498 SPIC JASPAR yes 55786338
chr17 70418484 70418920 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784989
chr17 70418488 70418924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784990
chr17 70418490 70418662 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784991
chr17 70418493 70418508 MEF2C JASPAR yes 55786339
chr17 70418495 70418510 FOXP1 JASPAR yes 55786340
chr17 70418496 70418511 FOXP1 JASPAR yes 55786341
chr17 70418497 70418503 TBP TRANSFAC yes 55786342
chr17 70418497 70418512 FOXP1 JASPAR yes 55786343
chr17 70418497 70418604 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784992
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784993
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290126
Genes associated with rs397953946[chr17:70418498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More