EnhancerDB
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  3. rs397954582[chr17:5726870]
Enhancers that have rs397954582[chr17:5726870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 5722485 5740477 enh32064
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9)
Transcript factors that have rs397954582[chr17:5726870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 5726862 5726874 IRF1 JASPAR yes 52885768
chr17 5726864 5726885 IRF1 JASPAR yes 52885769
chr17 5726866 5726881 PRDM1 JASPAR yes 52885770
chr17 5726866 5726881 STAT2 JASPAR yes 52885771
chr17 5726869 5726884 FOXP1 JASPAR yes 52885772
chr17 5726870 5726885 FOXP1 JASPAR yes 52885773
Genes associated with rs397954582[chr17:5726870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More