EnhancerDB
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  3. rs397960152[chr1:205640992]
Enhancers that have rs397960152[chr1:205640992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205631965 205647955 enh50152
Large Intestine Prostate (RWPE1) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs397960152[chr1:205640992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205640973 205640993 ESR1 JASPAR yes 34778185
chr1 205640976 205640996 PPARG JASPAR yes 34778186
chr1 205640978 205640993 ESR2 JASPAR yes 34778187
chr1 205640990 205641005 FOXP1 JASPAR yes 34778189
chr1 205640992 205641012 RREB1 JASPAR yes 34778190
Genes associated with rs397960152[chr1:205640992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More