EnhancerDB
  1. Home
  2. SNP
  3. rs397961843[chr1:23944648]
Enhancers that have rs397961843[chr1:23944648]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397961843[chr1:23944648]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23944639 23944653 SPI1 JASPAR yes 27448472
chr1 23944639 23944653 SPIC JASPAR yes 27448473
chr1 23944642 23944663 IRF1 JASPAR yes 27448474
chr1 23944645 23944660 FOXP1 JASPAR yes 27448475
chr1 23944647 23944662 FOXP1 JASPAR yes 27448476
chr1 23944648 23944663 FOXP1 JASPAR yes 27448477
Genes associated with rs397961843[chr1:23944648], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More