EnhancerDB
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  3. rs397979252[chr1:12666142]
Enhancers that have rs397979252[chr1:12666142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs397979252[chr1:12666142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12666139 12666154 FOXP1 JASPAR yes 26838441
chr1 12666140 12666155 FOXP1 JASPAR yes 26838442
chr1 12666141 12666156 FOXP1 JASPAR yes 26838443
chr1 12666142 12666157 FOXP1 JASPAR yes 26838444
chr1 12666142 12666163 IRF1 JASPAR yes 26838445
Genes associated with rs397979252[chr1:12666142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More