EnhancerDB
  1. Home
  2. SNP
  3. rs397979315[chr1:15511354]
Enhancers that have rs397979315[chr1:15511354]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs397979315[chr1:15511354]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15511349 15511368 CTCF JASPAR yes 26968169
chr1 15511352 15511366 ZIC1 JASPAR yes 26968170
Genes associated with rs397979315[chr1:15511354], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More