EnhancerDB
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  3. rs397979925[chr1:39421746]
Enhancers that have rs397979925[chr1:39421746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39414298 39432055 enh11754
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs397979925[chr1:39421746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39421741 39421756 MEF2C JASPAR yes 28243698
chr1 39421744 39421759 FOXP1 JASPAR yes 28243699
chr1 39421744 39421765 IRF1 JASPAR yes 28243700
chr1 39421745 39421751 TBP TRANSFAC yes 28243701
chr1 39421745 39421760 FOXP1 JASPAR yes 28243702
Genes associated with rs397979925[chr1:39421746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More