EnhancerDB
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  3. rs397988004[chr2:224622860]
Enhancers that have rs397988004[chr2:224622860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224621265 224629915 enh34324
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs397988004[chr2:224622860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224622855 224622870 MEF2C JASPAR yes 81284288
chr2 224622859 224622865 TBP TRANSFAC yes 81284289
chr2 224622860 224622872 FOXC2 JASPAR yes 81284290
Genes associated with rs397988004[chr2:224622860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More