EnhancerDB
  1. Home
  2. SNP
  3. rs397988295[chr2:235330388]
Enhancers that have rs397988295[chr2:235330388]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235326485 235339375 enh19342
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs397988295[chr2:235330388]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235330378 235330389 NFE2L2 JASPAR yes 81875794
chr2 235330386 235330390 YY1 TRANSFAC yes 81875795
chr2 235330386 235330401 FOXP1 JASPAR yes 81875796
chr2 235330387 235330402 FOXP1 JASPAR yes 81875797
chr2 235330388 235330403 FOXP1 JASPAR yes 81875798
Genes associated with rs397988295[chr2:235330388], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More