EnhancerDB
  1. Home
  2. SNP
  3. rs397988322[chr2:236513130]
Enhancers that have rs397988322[chr2:236513130]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236499845 236529222 enh19367
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs397988322[chr2:236513130]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236513119 236513134 MEF2C JASPAR yes 81984747
chr2 236513120 236513135 MEF2A JASPAR yes 81984748
chr2 236513123 236513138 FOXP1 JASPAR yes 81984749
chr2 236513125 236513140 FOXP1 JASPAR yes 81984750
chr2 236513125 236513140 MEF2C JASPAR yes 81984751
chr2 236513125 236513146 IRF1 JASPAR yes 81984752
chr2 236513126 236513141 FOXP1 JASPAR yes 81984753
chr2 236513127 236513142 FOXP1 JASPAR yes 81984754
chr2 236513128 236513143 FOXP1 JASPAR yes 81984755
chr2 236513128 236513149 IRF1 JASPAR yes 81984756
chr2 236513129 236513135 TBP TRANSFAC yes 81984757
chr2 236513129 236513144 FOXP1 JASPAR yes 81984758
Genes associated with rs397988322[chr2:236513130], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More