EnhancerDB
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  3. rs398001313[chr6:42005768]
Enhancers that have rs398001313[chr6:42005768]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs398001313[chr6:42005768]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42005765 42005780 FOXP1 JASPAR yes 101688738
chr6 42005766 42005781 FOXP1 JASPAR yes 101688739
chr6 42005767 42005782 FOXP1 JASPAR yes 101688740
chr6 42005767 42005788 IRF1 JASPAR yes 101688741
chr6 42005768 42005783 FOXP1 JASPAR yes 101688742
chr6 42005768 42005789 IRF1 JASPAR yes 101688743
Genes associated with rs398001313[chr6:42005768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More