EnhancerDB
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  3. rs398021233[chr12:117355796]
Enhancers that have rs398021233[chr12:117355796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117350745 117365303 enh2616
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs398021233[chr12:117355796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117355787 117355807 RREB1 JASPAR yes 124032196
chr12 117355793 117355808 FOXP1 JASPAR yes 124032197
chr12 117355794 117355809 FOXP1 JASPAR yes 124032198
chr12 117355794 117355815 IRF1 JASPAR yes 124032199
chr12 117355795 117355810 FOXP1 JASPAR yes 124032200
Genes associated with rs398021233[chr12:117355796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More