EnhancerDB
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  3. rs398028518[chr15:99980088]
Enhancers that have rs398028518[chr15:99980088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99971645 99998102 enh16467
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs398028518[chr15:99980088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99980068 99980089 IRF1 JASPAR yes 25873635
chr15 99980072 99980093 IRF1 JASPAR yes 25873639
chr15 99980073 99980088 FOXP1 JASPAR yes 25873640
chr15 99980074 99980089 STAT2 JASPAR yes 25873641
chr15 99980076 99980097 IRF1 JASPAR yes 25873642
chr15 99980077 99980092 FOXP1 JASPAR yes 25873643
chr15 99980077 99980098 IRF1 JASPAR yes 25873644
chr15 99980078 99980093 FOXP1 JASPAR yes 25873645
chr15 99980078 99980099 IRF1 JASPAR yes 25873646
chr15 99980082 99980103 IRF1 JASPAR yes 25873647
chr15 99980083 99980098 FOXP1 JASPAR yes 25873648
chr15 99980085 99980100 FOXP1 JASPAR yes 25873649
Genes associated with rs398028518[chr15:99980088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More