EnhancerDB
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  3. rs398041927[chr17:75335596]
Enhancers that have rs398041927[chr17:75335596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs398041927[chr17:75335596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75335590 75335611 IRF1 JASPAR yes 56069172
chr17 75335595 75335610 FOXP1 JASPAR yes 56069173
chr17 75335596 75335611 FOXP1 JASPAR yes 56069174
Genes associated with rs398041927[chr17:75335596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More