EnhancerDB
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  3. rs398042921[chr2:223652572]
Enhancers that have rs398042921[chr2:223652572]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223650265 223674035 enh19259
Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs398042921[chr2:223652572]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223652562 223652583 IRF1 JASPAR yes 81210441
chr2 223652566 223652587 IRF1 JASPAR yes 81210442
chr2 223652567 223652588 IRF1 JASPAR yes 81210443
chr2 223652568 223652589 IRF1 JASPAR yes 81210444
chr2 223652569 223652584 FOXP1 JASPAR yes 81210445
chr2 223652569 223652590 IRF1 JASPAR yes 81210446
chr2 223652571 223652586 FOXP1 JASPAR yes 81210447
chr2 223652572 223652587 FOXP1 JASPAR yes 81210448
Genes associated with rs398042921[chr2:223652572], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More