EnhancerDB
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  3. rs398079069[chr17:55690852]
Enhancers that have rs398079069[chr17:55690852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs398079069[chr17:55690852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55689750 55690927 TEF1 GTRD no Bone (Osteoblast) 108274213
chr17 55690132 55690988 ZNF274 GTRD no Blood (GM12878) 21773661
chr17 55690132 55690988 ZNF274 GTRD no Blood (GM12878) 108274233
chr17 55690838 55690852 SPIC JASPAR yes 54975549
chr17 55690851 55690857 TBP TRANSFAC yes 54975552
Genes associated with rs398079069[chr17:55690852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More