EnhancerDB
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  3. rs398101050[chr19:1406949]
Enhancers that have rs398101050[chr19:1406949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1404765 1415275 enh32872
Esophagus Astrocyte Bone (Osteoblast) Uterus Neural Stem Cells (H9)
Transcript factors that have rs398101050[chr19:1406949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1406214 1409566 ZNF143 GTRD no Epithelial (MCF-7) 108353467
chr19 1406214 1409566 ZNF143 GTRD no Epithelial (MCF-7) 108353468
chr19 1406320 1409116 ZNF274 GTRD no Bone Marrow (K562) 108353469
chr19 1406320 1409116 ZNF274 GTRD no Bone Marrow (K562) 108353470
chr19 1406342 1409341 ZNF274 GTRD no Cervix (HeLa-S3) 108353471
chr19 1406342 1409341 ZNF274 GTRD no Cervix (HeLa-S3) 108353472
chr19 1406388 1410661 ZNF274 GTRD no Blood (GM12878) 108353473
chr19 1406388 1410661 ZNF274 GTRD no Blood (GM12878) 108353474
chr19 1406388 1410661 ZNF274 GTRD no Blood (GM12878) 108353475
chr19 1406419 1409858 ZNF274 GTRD no Blood (GM12878) 108353476
chr19 1406419 1409858 ZNF274 GTRD no Blood (GM12878) 108353477
chr19 1406434 1409072 ZNF143 GTRD no Epithelial (MCF-7) 108353478
chr19 1406434 1409072 ZNF143 GTRD no Epithelial (MCF-7) 108353479
chr19 1406439 1408908 ZNF143 GTRD no Epithelial (MCF-7) 108353480
chr19 1406439 1408908 ZNF143 GTRD no Epithelial (MCF-7) 108353481
chr19 1406468 1410010 ZNF274 GTRD no Liver (HepG2) 108353482
chr19 1406468 1410010 ZNF274 GTRD no Liver (HepG2) 108353483
chr19 1406478 1408645 ZNF274 GTRD no Bone Marrow (K562) 108353484
chr19 1406516 1409000 ZNF274 GTRD no Bone Marrow (K562) 108353485
chr19 1406516 1409000 ZNF274 GTRD no Bone Marrow (K562) 108353486
chr19 1406526 1409218 ZNF274 GTRD no Liver (HepG2) 108353487
chr19 1406526 1409218 ZNF274 GTRD no Liver (HepG2) 108353488
chr19 1406540 1408746 ZNF274 GTRD no Blood (GM12878) 108353489
chr19 1406541 1409194 ZNF274 GTRD no Bone Marrow (K562) 108353490
chr19 1406541 1409194 ZNF274 GTRD no Bone Marrow (K562) 108353491
chr19 1406543 1409813 ZNF274 GTRD no Bone Marrow (K562) 108353492
chr19 1406543 1409813 ZNF274 GTRD no Bone Marrow (K562) 108353493
chr19 1406549 1409952 ZNF274 GTRD no Bone Marrow (K562) 108353494
chr19 1406549 1409952 ZNF274 GTRD no Bone Marrow (K562) 108353495
chr19 1406571 1409110 ZNF274 GTRD no Bone Marrow (K562) 108353496
chr19 1406571 1409110 ZNF274 GTRD no Bone Marrow (K562) 108353497
chr19 1406572 1409057 ZNF274 GTRD no Blood (GM12878) 108353498
chr19 1406572 1409057 ZNF274 GTRD no Blood (GM12878) 108353499
chr19 1406582 1409186 ZNF274 GTRD no Blood (GM12878) 108353500
chr19 1406582 1409186 ZNF274 GTRD no Blood (GM12878) 108353501
chr19 1406587 1412516 TCF7L2 GTRD no Colon (HCT116) 108353502
chr19 1406587 1412516 TCF7L2 GTRD no Colon (HCT116) 108353503
chr19 1406587 1412516 TCF7L2 GTRD no Colon (HCT116) 108353504
chr19 1406587 1412516 TCF7L2 GTRD no Colon (HCT116) 108353505
chr19 1406606 1409056 TCF7L2 GTRD no Colon (HCT116) 108353506
chr19 1406606 1409056 TCF7L2 GTRD no Colon (HCT116) 108353507
chr19 1406614 1408654 ZNF274 GTRD no Blood (GM12878) 108353508
chr19 1406622 1409174 ZNF274 GTRD no Blood (GM12878) 108353509
chr19 1406622 1409174 ZNF274 GTRD no Blood (GM12878) 108353510
chr19 1406627 1409358 ZNF274 GTRD no Bone Marrow (K562) 108353511
chr19 1406627 1409358 ZNF274 GTRD no Bone Marrow (K562) 108353512
chr19 1406628 1411897 TCF7L2 GTRD no Colon (HCT116) 108353513
chr19 1406628 1411897 TCF7L2 GTRD no Colon (HCT116) 108353514
chr19 1406628 1411897 TCF7L2 GTRD no Colon (HCT116) 108353515
chr19 1406628 1411897 TCF7L2 GTRD no Colon (HCT116) 108353516
chr19 1406634 1409580 TCF7L2 GTRD no Colon (HCT116) 108353517
chr19 1406634 1409580 TCF7L2 GTRD no Colon (HCT116) 108353518
chr19 1406637 1409183 ZNF274 GTRD no Liver (HepG2) 108353519
chr19 1406637 1409183 ZNF274 GTRD no Liver (HepG2) 108353520
chr19 1406644 1408927 TCF7L2 GTRD no Colon (HCT116) 108353521
chr19 1406644 1408927 TCF7L2 GTRD no Colon (HCT116) 108353522
chr19 1406732 1409418 TCF7L2 GTRD no Colon (HCT116) 108353523
chr19 1406732 1409418 TCF7L2 GTRD no Colon (HCT116) 108353524
chr19 1406750 1410251 TCF7L2 GTRD no Colon (HCT116) 108353525
chr19 1406750 1410251 TCF7L2 GTRD no Colon (HCT116) 108353526
chr19 1406763 1408920 TCF7L2 GTRD no Colon (HCT116) 108353527
chr19 1406763 1408920 TCF7L2 GTRD no Colon (HCT116) 108353528
chr19 1406767 1408860 TCF7L2 GTRD no Colon (HCT116) 108353529
chr19 1406767 1408860 TCF7L2 GTRD no Colon (HCT116) 108353530
chr19 1406771 1410663 POLR2A UCSC Txn Factor no Conserved 108353531
chr19 1406771 1410663 POLR2A UCSC Txn Factor no Conserved 108353532
chr19 1406771 1410663 POLR2A UCSC Txn Factor no Conserved 108353533
chr19 1406775 1409120 ZNF274 GTRD no Blood (GM12878) 108353534
chr19 1406775 1409120 ZNF274 GTRD no Blood (GM12878) 108353535
chr19 1406784 1410677 TCF7L2 GTRD no Colon (HCT116) 108353536
chr19 1406784 1410677 TCF7L2 GTRD no Colon (HCT116) 108353537
chr19 1406784 1410677 TCF7L2 GTRD no Colon (HCT116) 108353538
chr19 1406806 1408984 ZNF274 GTRD no Blood (GM12878) 108353539
chr19 1406806 1408984 ZNF274 GTRD no Blood (GM12878) 108353540
chr19 1406829 1409303 ZNF274 GTRD no Bone Marrow (K562) 108353541
chr19 1406829 1409303 ZNF274 GTRD no Bone Marrow (K562) 108353542
chr19 1406855 1409362 ZNF274 GTRD no Bone Marrow (K562) 108353543
chr19 1406855 1409362 ZNF274 GTRD no Bone Marrow (K562) 108353544
chr19 1406887 1409147 ZNF274 GTRD no Bone Marrow (K562) 108353545
chr19 1406887 1409147 ZNF274 GTRD no Bone Marrow (K562) 108353546
chr19 1406915 1409355 ZNF274 GTRD no Bone Marrow (K562) 108353547
chr19 1406915 1409355 ZNF274 GTRD no Bone Marrow (K562) 108353548
chr19 1406944 1408884 ZNF274 GTRD no Liver (HepG2) 108353549
chr19 1406944 1408884 ZNF274 GTRD no Liver (HepG2) 108353550
chr19 1406947 1406957 ZNF740 JASPAR yes 112012973
chr19 1406948 1406958 SP1 JASPAR yes 112012974
chr19 1406948 1406958 ZNF740 JASPAR yes 112012975
chr19 1406949 1406959 SP1 JASPAR yes 112012976
chr19 1406949 1406959 ZNF740 JASPAR yes 112012977
Genes associated with rs398101050[chr19:1406949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More