EnhancerDB
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  3. rs398119850[chr17:46559713]
Enhancers that have rs398119850[chr17:46559713]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs398119850[chr17:46559713]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46559700 46559715 MEF2C JASPAR yes 54588139
chr17 46559701 46559716 MEF2A JASPAR yes 54588140
chr17 46559702 46559714 MEF2A JASPAR yes 54588141
chr17 46559702 46559714 MEF2B JASPAR yes 54588142
chr17 46559702 46559714 MEF2D JASPAR yes 54588143
Genes associated with rs398119850[chr17:46559713], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 45600308 45700642 + NPEPPS ENSG00000141279.11 45600308 859071 Pancreas 0.33543 15972