EnhancerDB
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  3. rs4073080[chr1:203279915]
Enhancers that have rs4073080[chr1:203279915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4073080[chr1:203279915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203278653 203279976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21368065
chr1 203278869 203283583 ZNF143 GTRD no Epithelial (MCF-7) 21368068
chr1 203279864 203283218 ZNF143 GTRD no Epithelial (MCF-7) 21368074
chr1 203279900 203279916 POU4F3 JASPAR yes 34615621
chr1 203279901 203279916 FOXA1 JASPAR yes 34615623
chr1 203279902 203279916 POU4F1 JASPAR yes 34615625
chr1 203279902 203279917 FOXP1 JASPAR yes 34615626
chr1 203279902 203279917 HNF1A JASPAR yes 34615627
chr1 203279903 203279915 FOXC2 JASPAR yes 34615628
chr1 203279903 203279917 ONECUT2 JASPAR yes 34615629
chr1 203279903 203279917 ONECUT3 JASPAR yes 34615630
chr1 203279903 203283339 ZNF143 GTRD no Epithelial (MCF-7) 21368075
chr1 203279904 203279915 FOXB1 JASPAR yes 34615631
chr1 203279904 203279915 FOXC1 JASPAR yes 34615632
chr1 203279904 203279915 PROP1 JASPAR yes 34615633
chr1 203279906 203279918 FOXI1 JASPAR yes 34615635
chr1 203279906 203279921 FOXP1 JASPAR yes 34615636
chr1 203279907 203279921 ONECUT2 JASPAR yes 34615637
chr1 203279907 203279921 ONECUT3 JASPAR yes 34615638
chr1 203279913 203279917 YY1 TRANSFAC yes 34615640
chr1 203279913 203279934 IRF1 JASPAR yes 34615641
chr1 203279914 203279929 FOXP1 JASPAR yes 34615642
chr1 203279914 203279935 IRF1 JASPAR yes 34615643
chr1 203279915 203279930 STAT2 JASPAR yes 34615644
Genes associated with rs4073080[chr1:203279915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More