EnhancerDB
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  3. rs408388[chr1:20796491]
Enhancers that have rs408388[chr1:20796491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20794681 20806725 enh11583
Brain (SK-N-SH) Prostate (RWPE1) Large Intestine Stomach Placenta Lung (PC-9) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs408388[chr1:20796491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20796474 20796493 RFX2 JASPAR yes 27248680
chr1 20796478 20796494 RFX2 JASPAR yes 27248681
chr1 20796478 20796494 RFX3 JASPAR yes 27248682
chr1 20796478 20796494 RFX4 JASPAR yes 27248683
chr1 20796478 20796494 RFX5 JASPAR yes 27248684
chr1 20796482 20796494 POU2F1 JASPAR yes 27248685
chr1 20796482 20796495 POU3F3 JASPAR yes 27248686
chr1 20796483 20796495 POU3F1 JASPAR yes 27248687
chr1 20796483 20796495 POU3F2 JASPAR yes 27248688
chr1 20796484 20796493 POU3F4 JASPAR yes 27248689
chr1 20796484 20796493 POU5F1B JASPAR yes 27248690
Genes associated with rs408388[chr1:20796491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More