EnhancerDB
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  3. rs41301525[chr9:116346236]
Enhancers that have rs41301525[chr9:116346236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 116325685 116352877 enh25925
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs41301525[chr9:116346236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 116346225 116346237 NHLH1 JASPAR yes 86427165
chr9 116346226 116346236 NHLH1 JASPAR yes 86427166
chr9 116346226 116346236 TCF3 JASPAR yes 86427167
chr9 116346226 116346236 TCF4 JASPAR yes 86427168
chr9 116346228 116346242 PLAG1 JASPAR yes 86427170
chr9 116346233 116346248 TFAP2A JASPAR yes 86427171
chr9 116346233 116346248 TFAP2C JASPAR yes 86427172
chr9 116346233 116346252 REST JASPAR yes 86427173
chr9 116346235 116346250 TFAP2A JASPAR yes 86427174
Genes associated with rs41301525[chr9:116346236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More