EnhancerDB
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Enhancers that have rs4240534[chr1:113175429]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113174365 113185519 enh568
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (A549) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs4240534[chr1:113175429]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113175427 113175437 EN2 JASPAR yes 31582860
chr1 113175427 113175437 ESX1 JASPAR yes 31582861
chr1 113175427 113175437 GBX1 JASPAR yes 31582862
chr1 113175427 113175437 GBX2 JASPAR yes 31582863
chr1 113175427 113175437 HESX1 JASPAR yes 31582864
chr1 113175427 113175437 LBX2 JASPAR yes 31582865
chr1 113175427 113175437 LHX2 JASPAR yes 31582866
chr1 113175427 113175437 MIXL1 JASPAR yes 31582867
chr1 113175427 113175437 MNX1 JASPAR yes 31582868
chr1 113175427 113175437 RAX JASPAR yes 31582869
chr1 113175428 113175436 BARX1 JASPAR yes 31582870
chr1 113175428 113175436 BSX JASPAR yes 31582871
chr1 113175428 113175436 DLX6 JASPAR yes 31582872
chr1 113175428 113175436 ISX JASPAR yes 31582873
chr1 113175428 113175436 LBX1 JASPAR yes 31582874
chr1 113175428 113175436 LHX9 JASPAR yes 31582875
chr1 113175428 113175436 MSX1 JASPAR yes 31582876
chr1 113175428 113175436 MSX2 JASPAR yes 31582877
chr1 113175428 113175436 NKX6-2 JASPAR yes 31582878
chr1 113175428 113175436 PRRX1 JASPAR yes 31582879
chr1 113175428 113175436 RAX2 JASPAR yes 31582880
chr1 113175428 113175436 SHOX JASPAR yes 31582881
chr1 113175428 113175436 UNCX JASPAR yes 31582882
Genes associated with rs4240534[chr1:113175429], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More