EnhancerDB
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  3. rs4255390[chr1:222016107]
Enhancers that have rs4255390[chr1:222016107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4255390[chr1:222016107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222016090 222016110 TP53 JASPAR yes 35574415
chr1 222016105 222016120 MEF2A JASPAR yes 35574417
chr1 222016106 222016121 MEF2C JASPAR yes 35574418
chr1 222016107 222016122 FOXA1 JASPAR yes 35574419
Genes associated with rs4255390[chr1:222016107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More