EnhancerDB
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  3. rs4258956[chr3:9455051]
Enhancers that have rs4258956[chr3:9455051]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 9436025 9464855 enh6987
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Lung (PC-9) Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Heart
Transcript factors that have rs4258956[chr3:9455051]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 9455047 9455051 YY1 TRANSFAC yes 350060
chr3 9455048 9455058 HOXC10 JASPAR yes 350061
chr3 9455048 9455058 HOXD11 JASPAR yes 350062
chr3 9455048 9455059 HOXA10 JASPAR yes 350063
chr3 9455048 9455059 HOXC11 JASPAR yes 350064
chr3 9455048 9455059 HOXC12 JASPAR yes 350065
chr3 9455048 9455059 HOXC13 JASPAR yes 350066
chr3 9455049 9455058 CDX1 JASPAR yes 350067
chr3 9455049 9455060 CDX2 JASPAR yes 350068
Genes associated with rs4258956[chr3:9455051], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More