EnhancerDB
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  3. rs4342858[chr1:222015226]
Enhancers that have rs4342858[chr1:222015226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4342858[chr1:222015226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222015212 222015226 FOXF2 JASPAR yes 35574304
chr1 222015212 222015227 FOXP1 JASPAR yes 35574305
chr1 222015213 222015228 FOXA1 JASPAR yes 35574307
chr1 222015214 222015226 FOXC2 JASPAR yes 35574308
chr1 222015215 222015226 FOXP2 JASPAR yes 35574309
chr1 222015217 222015226 SRY JASPAR yes 35574319
chr1 222015223 222015235 POU2F1 JASPAR yes 35574320
chr1 222015224 222015233 POU3F4 JASPAR yes 35574321
chr1 222015224 222015233 POU5F1B JASPAR yes 35574322
chr1 222015226 222015242 POU4F2 JASPAR yes 35574323
Genes associated with rs4342858[chr1:222015226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More