EnhancerDB
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  3. rs4390878[chr3:149025172]
Enhancers that have rs4390878[chr3:149025172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149022565 149035755 enh35975
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs4390878[chr3:149025172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149025169 149025188 CTCF JASPAR yes 6482391
chr3 149025170 149025185 ZIC3 JASPAR yes 6482392
chr3 149025170 149025185 ZIC4 JASPAR yes 6482393
chr3 149025171 149025182 NRL JASPAR yes 6482394
chr3 149025171 149025185 ZIC1 JASPAR yes 6482395
Genes associated with rs4390878[chr3:149025172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More