EnhancerDB
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  3. rs4475740[chr1:39425489]
Enhancers that have rs4475740[chr1:39425489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39414298 39432055 enh11754
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs4475740[chr1:39425489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39425479 39425492 SMAD2 JASPAR yes 28244258
chr1 39425486 39425498 PKNOX2 JASPAR yes 28244259
chr1 39425487 39425496 SNAI2 JASPAR yes 28244260
chr1 39425487 39425497 FIGLA JASPAR yes 28244261
chr1 39425487 39425497 ID4 JASPAR yes 28244262
Genes associated with rs4475740[chr1:39425489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More