EnhancerDB
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  3. rs4479227[chr16:4966210]
Enhancers that have rs4479227[chr16:4966210]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4960125 4978075 enh31675
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs4479227[chr16:4966210]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4966196 4966217 IRF1 JASPAR yes 9290558
chr16 4966198 4966213 FOXP1 JASPAR yes 9290559
chr16 4966201 4966216 MEF2A JASPAR yes 9290560
chr16 4966202 4966217 MEF2C JASPAR yes 9290561
chr16 4966203 4966215 FOXC2 JASPAR yes 9290562
chr16 4966203 4966215 MEF2A JASPAR yes 9290563
chr16 4966203 4966215 MEF2B JASPAR yes 9290564
chr16 4966203 4966215 MEF2D JASPAR yes 9290565
chr16 4966204 4966214 MEF2A JASPAR yes 9290566
chr16 4966207 4966217 HOXA13 JASPAR yes 9290568
chr16 4966207 4966217 HOXB13 JASPAR yes 9290569
chr16 4966207 4966217 HOXC10 JASPAR yes 9290570
chr16 4966207 4966217 HOXD13 JASPAR yes 9290571
chr16 4966207 4966218 HOXA10 JASPAR yes 9290572
chr16 4966208 4966217 CDX1 JASPAR yes 9290573
chr16 4966208 4966218 MNX1 JASPAR yes 9290574
chr16 4966208 4966219 CDX2 JASPAR yes 9290575
chr16 4966209 4966225 POU4F2 JASPAR yes 9290576
chr16 4966209 4966225 POU4F3 JASPAR yes 9290577
Genes associated with rs4479227[chr16:4966210], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More