EnhancerDB
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  3. rs4516936[chr6:42011717]
Enhancers that have rs4516936[chr6:42011717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4516936[chr6:42011717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42011704 42011718 JUN JASPAR yes 101689467
chr6 42011709 42011724 SCRT1 JASPAR yes 101689468
chr6 42011712 42011724 PKNOX1 JASPAR yes 101689469
chr6 42011712 42011724 PKNOX2 JASPAR yes 101689470
chr6 42011712 42011724 TGIF1 JASPAR yes 101689471
chr6 42011712 42011724 TGIF2 JASPAR yes 101689472
chr6 42011713 42011722 SNAI2 JASPAR yes 101689473
chr6 42011713 42011723 ID4 JASPAR yes 101689474
chr6 42011713 42011723 MSC JASPAR yes 101689475
chr6 42011713 42011723 TCF3 JASPAR yes 101689476
chr6 42011716 42011724 TBX15 JASPAR yes 101689477
chr6 42011716 42011724 TBX1 JASPAR yes 101689478
chr6 42011716 42011724 TBX4 JASPAR yes 101689479
chr6 42011716 42011724 TBX5 JASPAR yes 101689480
Genes associated with rs4516936[chr6:42011717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More